Co-expression analysis

Gene ID Ta.7894.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g45240: MAP1A (METHIONINE AMINOPEPTIDASE 1A) (HF=1e-27)
Module size 6 genes
NF 0.57
%ile 82.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.98Ta.7894.1.S1_atCA678008--1e-27At2g45240MAP1A (METHIONINE AMINOPEPTIDASE 1A)O.I.H.G.S.X.
0.6786.30.98Ta.20463.1.S1_atBT009342.1--2e-5At5g27470seryl-tRNA synthetase / serine--tRNA ligaseO.I.H.G.S.X.
0.6081.00.98Ta.1529.1.S1_atCK153906--5e-21At4g39280phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putativeO.I.H.G.S.X.
0.4464.50.98Ta.2490.1.S1_atBJ250631--4e-46At3g59990MAP2B (METHIONINE AMINOPEPTIDASE 2B)O.I.H.G.S.X.
0.4058.40.98Ta.8547.1.S1_atM95747.1initiation factor (iso)4f p82 subunit-8e-15At5g57870eukaryotic translation initiation factor 4F, putative / eIF-4F, putativeO.I.H.G.S.X.
0.2329.00.98Ta.14560.1.S1_atBJ274621--2e-40At5g63400ADK1 (ADENYLATE KINASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.599.5GSM298057Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
10.499.2GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
9.599.1GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
8.999.0GSM298058Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.598.9GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
8.498.9GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
8.498.9GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
7.998.7GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.598.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.398.2GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage