Co-expression analysis

Gene ID	Ta.7882.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g04790: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.36
%ile	58.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.4	0.95	Ta.7882.2.S1_at	CA645408	-	-	1e+0	At2g04790	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.89	Ta.7882.1.S1_x_at	BQ160849	-	-	2e+0	At4g16750	DRE-binding transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.88	Ta.7882.1.S1_at	BQ160849	-	-	2e+0	At4g16750	DRE-binding transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.89	Ta.18807.1.A1_at	CA642371	-	-	8e-2	At3g48460	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.89	Ta.25483.1.S1_at	CD452469	-	-	2e-2	At4g30390	unknown protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.89	Ta.19224.1.S1_at	CA648993	-	-	3e+0	At3g51220	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.1	99.6	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
16.6	99.6	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
16.4	99.6	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
16.2	99.6	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.4	99.2	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.5	99.1	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.2	98.8	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.7	98.7	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.9	98.4	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.0	98.0	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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