Co-expression analysis

Gene ID Ta.7751.2.A1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g62020: GLP10 (GERMIN-LIKE PROTEIN 10) (HF=5e-1)
Module size 6 genes
NF 0.00
%ile 0.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.00.81Ta.7751.2.A1_x_atCA740883--5e-1At3g62020GLP10 (GERMIN-LIKE PROTEIN 10)O.I.H.G.S.X.
0.1112.40.89Ta.2554.3.A1_atCA726606--3e-1At3g13672seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.1112.40.88Ta.24372.3.S1_x_atCA708812--2e+1At5g63040unknown proteinO.I.H.G.S.X.
0.078.60.87Ta.8245.2.S1_x_atCA680416--4e+0At5g13570DCP2 (DECAPPING 2)O.I.H.G.S.X.
-0.70.85Ta.19453.1.S1_x_atCA652007--8e-2At3g23610dual specificity protein phosphatase (DsPTP1)O.I.H.G.S.X.
-0.70.83TaAffx.114398.1.S1_atCA593807--6e-1At1g26670VTI1BO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.798.4GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.698.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.697.8GSM298060Crown tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.397.6GSM298061Crown tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.197.5GSM298093Crown tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.097.4GSM298085Crown tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.797.1GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM138193genotype B33 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
4.596.9GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.4767.1.A1_at, orthologous to the query gene, Ta.7751.2.A1_x_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7188.2Zm.4767.1.A1_atAt3g62020glutamyl-tRNA synthetase, cytoplasmic-3e+0At3g50900unknown proteinO.I.H.G.S.X.
0.6785.8Zm.4024.2.S1_atAt3g62020--3e+0At3g07970QRT2 (QUARTET 2)O.I.H.G.S.X.
0.6785.8Zm.9612.1.A1_atAt3g62020--1e+0At4g14226unknown proteinO.I.H.G.S.X.
0.6785.8Zm.9613.1.A1_atAt3g62020--2e+0At4g23890unknown proteinO.I.H.G.S.X.
0.6785.8Zm.9613.1.S1_atAt3g62020--2e+0At4g23890unknown proteinO.I.H.G.S.X.
0.5369.1Zm.1409.1.S1_atAt3g62020pectinesterase inhibitor domain containing protein-1e-1At1g34750protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4251.3Zm.15200.1.A1_atAt3g62020--4e+0At5g56610dual specificity protein phosphatase family proteinO.I.H.G.S.X.
0.169.4Zm.6580.2.A1_atAt3g62020succinyl-CoA ligase beta-chain-4e-22At2g20420succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera



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