Co-expression analysis

Gene ID Ta.7751.2.A1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g62020: GLP10 (GERMIN-LIKE PROTEIN 10) (HF=5e-1)
Module size 6 genes
NF 0.00
%ile 0.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.00.81Ta.7751.2.A1_x_atCA740883--5e-1At3g62020GLP10 (GERMIN-LIKE PROTEIN 10)O.I.H.G.S.X.
0.1112.40.89Ta.2554.3.A1_atCA726606--3e-1At3g13672seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.1112.40.88Ta.24372.3.S1_x_atCA708812--2e+1At5g63040unknown proteinO.I.H.G.S.X.
0.078.60.87Ta.8245.2.S1_x_atCA680416--4e+0At5g13570DCP2 (DECAPPING 2)O.I.H.G.S.X.
-0.70.85Ta.19453.1.S1_x_atCA652007--8e-2At3g23610dual specificity protein phosphatase (DsPTP1)O.I.H.G.S.X.
-0.70.83TaAffx.114398.1.S1_atCA593807--6e-1At1g26670VTI1BO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.798.4GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.698.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.697.8GSM298060Crown tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.397.6GSM298061Crown tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.197.5GSM298093Crown tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.097.4GSM298085Crown tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.797.1GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM138193genotype B33 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
4.596.9GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, PsAffx.CL380Contig1_at, orthologous to the query gene, Ta.7751.2.A1_x_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9093.7PsAffx.CL380Contig1_atAt3g62020--2e-2At3g26790FUS3 (FUSCA 3)O.I.H.G.S.X.
0.7288.1PsAffx.CL322Contig1_s_atAt3g62020--2e+1At5g44578unknown proteinO.I.H.G.S.X.
0.6986.8GmaAffx.35357.1.A1_s_atAt3g62020--8e-13At2g36530LOS2O.I.H.G.S.X.
0.6986.8PsAffx.CL208Contig1_atAt3g62020--1e+1At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.6886.4PsAffx.CL151Contig1_atAt3g62020--2e+0At5g46730glycine-rich proteinO.I.H.G.S.X.
0.6886.4PsAffx.CL164Contig1_atAt3g62020--1e-2At5g51820PGM (PHOSPHOGLUCOMUTASE)O.I.H.G.S.X.
0.6583.8PsAffx.C77000032_s_atAt3g62020--2e-12At5g02490heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2)O.I.H.G.S.X.
0.6483.4PsAffx.CL809Contig1_atAt3g62020--2e-3At5g42740glucose-6-phosphate isomerase, cytosolic (PGIC)O.I.H.G.S.X.
0.6382.9PsAffx.psMY005iE01r_s_atAt3g62020--1e-3At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.6181.8PsAffx.psMC009xE03f_atAt3g62020--2e-1At3g10405unknown proteinO.I.H.G.S.X.
0.6080.7PsAffx.CL29Contig1_atAt3g62020--3e-5At4g3467040S ribosomal protein S3A (RPS3aB)O.I.H.G.S.X.
0.6080.7PsAffx.CL474Contig1_atAt3g62020--1e+0At2g20080unknown proteinO.I.H.G.S.X.
0.5878.8PsAffx.CL4Contig3_atAt3g62020--7e-1At5g14590isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putativeO.I.H.G.S.X.
0.5878.8GmaAffx.39956.1.A1_s_atAt3g62020--1e+1At3g44100MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.H.G.S.X.
0.5576.3PsAffx.CL228Contig1_atAt3g62020--6e-1At5g62630HIPL2 (HIPL2 PROTEIN PRECURSOR)O.I.H.G.S.X.
0.4867.7PsAffx.CL124Contig1_atAt3g62020--2e-4At2g23930SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G)O.I.H.G.S.X.
0.4867.7GmaAffx.44524.1.S1_s_atAt3g62020--3e+0At5g47550cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.4463.3PsAffx.CL470Contig1_atAt3g62020--6e+0At2g04480unknown proteinO.I.H.G.S.X.
0.4463.3PsAffx.CL10Contig1_atAt3g62020--1e-1At3g5387040S ribosomal protein S3 (RPS3B)O.I.H.G.S.X.
0.4158.1GmaAffx.62779.1.S1_s_atAt3g62020--4e+0At5g41350zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4158.1GmaAffx.49171.1.S1_s_atAt3g62020--4e-2At3g5387040S ribosomal protein S3 (RPS3B)O.I.H.G.S.X.
0.3853.3PsAffx.CL167Contig1_atAt3g62020--3e-5At3g62560GTP-binding protein, putativeO.I.H.G.S.X.
0.3650.8GmaAffx.53609.1.S1_s_atAt3g62020--1e+1At5g03840TFL1 (TERMINAL FLOWER 1)O.I.H.G.S.X.
0.3243.7PsAffx.CL3Contig1_atAt3g62020--1e+0At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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