Co-expression analysis

Gene ID	Ta.7685.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At4g16340: SPK1 (SPIKE1) (HF=1e-63)
Module size	6 genes
NF	0.72
%ile	93.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.98	Ta.7685.1.A1_at	CK166088	-	-	1e-63	At4g16340	SPK1 (SPIKE1)	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.98	Ta.5089.1.A1_at	BJ276838	-	-	1e-28	At1g73720	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.98	Ta.4932.1.A1_s_at	BJ274109	-	-	8e-2	At1g12890	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.98	Ta.4932.1.A1_at	BJ274109	-	-	8e-2	At1g12890	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.98	Ta.3789.3.A1_at	CD873220	-	-	2e-5	At3g05590	RPL18 (RIBOSOMAL PROTEIN L18)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.98	Ta.7661.1.S1_at	BQ171269	-	-	2e-7	At1g64350	SEH1H	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.3	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.3	95.0	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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