Co-expression analysis

Gene ID Ta.7635.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g10522: unknown protein (HF=8e-2)
Module size 6 genes
NF 0.47
%ile 72.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.10.94Ta.7635.1.A1_atBG907453--8e-2At1g10522unknown proteinO.I.H.G.S.X.
0.4464.50.96Ta.1964.1.S1_a_atCD890475--2e+0At3g13500unknown proteinO.I.H.G.S.X.
0.4058.40.96Ta.13194.1.S1_atBJ266127--4e-3At3g29034unknown proteinO.I.H.G.S.X.
0.4058.40.97Ta.1964.3.S1_x_atCK213330--2e+0At3g13500unknown proteinO.I.H.G.S.X.
0.3346.90.96TaAffx.59588.2.S1_atCA609866--4e-3At3g18165MOS4 (Modifier of snc1,4)O.I.H.G.S.X.
0.3142.70.96Ta.28883.1.A1_atAJ612385--5e+0At5g20720CPN20 (CHAPERONIN 20)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.899.4GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.897.2GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.096.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM143520Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.994.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.793.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.34431.1.A1_at, orthologous to the query gene, Ta.7635.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9093.7GmaAffx.34431.1.A1_atAt1g10522--3e+0At5g59960unknown proteinO.I.H.G.S.X.
0.6684.0Gma.15509.2.A1_atAt1g10522--7e-1At4g09012-O.I.H.G.S.X.
0.5576.3Gma.17962.1.S1_atAt1g10522--8e-1At2g19060GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.5273.1Gma.6589.1.S1_atAt1g10522--4e-9At4g24830arginosuccinate synthase familyO.I.H.G.S.X.
0.5172.3GmaAffx.20415.1.A1_atAt1g10522--3e+0At5g18250unknown proteinO.I.H.G.S.X.
0.5071.7GmaAffx.47099.1.A1_atAt1g10522--3e-1At2g19820LBD9 (LOB DOMAIN-CONTAINING PROTEIN 9)O.I.H.G.S.X.
0.4968.3GmaAffx.16553.1.A1_atAt1g10522--5e+0At3g15610transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.4968.3GmaAffx.38078.1.S1_atAt1g10522--4e-4At5g3985040S ribosomal protein S9 (RPS9C)O.I.H.G.S.X.
0.4867.7Gma.7748.1.S1_atAt1g10522--9e-6At3g60360EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14)O.I.H.G.S.X.
0.4665.5Gma.1520.1.S1_atAt1g10522--3e+0At4g27810unknown proteinO.I.H.G.S.X.
0.4360.6Gma.12359.1.S1_atAt1g10522--4e+0At5g66370unknown proteinO.I.H.G.S.X.
0.4259.3Gma.13600.1.A1_atAt1g10522--9e-1At2g26511unknown proteinO.I.H.G.S.X.
0.4259.3Gma.15705.1.S1_atAt1g10522--2e-19At1g18450ATARP4O.I.H.G.S.X.
0.4057.1GmaAffx.6320.1.S1_atAt1g10522--7e-1At1g34010unknown proteinO.I.H.G.S.X.
0.4057.1GmaAffx.4882.1.A1_atAt1g10522--4e+0At1g62333unknown proteinO.I.H.G.S.X.
0.4057.1Gma.6467.2.A1_atAt1g10522MSI1-2e-11At5g58230MSI1 (MULTICOPY SUPRESSOR OF IRA1)O.I.H.G.S.X.
0.3954.5GmaAffx.52672.1.S1_atAt1g10522--5e-2At5g02100UNE18 (UNFERTILIZED EMBRYO SAC 18)O.I.H.G.S.X.
0.3954.5Gma.4467.1.A1_atAt1g10522--4e+0At3g49645unknown proteinO.I.H.G.S.X.
0.3954.5GmaAffx.23435.1.S1_atAt1g10522--3e+0At4g24930thylakoid lumenal 17.9 kDa protein, chloroplastO.I.H.G.S.X.
0.3954.5Gma.12703.1.A1_atAt1g10522--3e+0At1g76040CPK29O.I.H.G.S.X.
0.3650.8Gma.5111.2.S1_atAt1g10522--3e-46At5g50370adenylate kinase, putativeO.I.H.G.S.X.
0.3650.8GmaAffx.23052.1.S1_atAt1g10522--8e-1Atmg00320-O.I.H.G.S.X.
0.3548.6Gma.13428.1.A1_atAt1g10522--3e+0At4g33520PAA1 (P-TYPE ATP-ASE 1)O.I.H.G.S.X.
0.3447.2Gma.13055.1.A1_atAt1g10522--5e-13At2g37020DNA binding / sequence-specific DNA bindingO.I.H.G.S.X.
0.2939.0Gma.3610.1.S1_atAt1g10522--7e-43At4g02840small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeO.I.H.G.S.X.
0.2939.0Gma.10414.1.A1_atAt1g10522--1e-9At5g57120-O.I.H.G.S.X.
0.2939.0GmaAffx.971.1.S1_atAt1g10522--7e+0At4g3080040S ribosomal protein S11 (RPS11B)O.I.H.G.S.X.
0.2939.0Gma.8037.1.S1_atAt1g10522--3e-10At3g11830chaperonin, putativeO.I.H.G.S.X.
0.2839.0GmaAffx.72797.2.S1_atAt1g10522--4e+0At4g35785nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.2839.0Gma.7369.1.S1_s_atAt1g10522--3e-26At3g45980HTB9O.I.H.G.S.X.
0.2735.7GmaAffx.42109.1.S1_atAt1g10522--6e-1At1g50980F-box family proteinO.I.H.G.S.X.
0.2633.9GmaAffx.16438.1.A1_atAt1g10522--1e+0At1g03180unknown proteinO.I.H.G.S.X.
0.2430.9Gma.5161.1.S1_atAt1g10522--8e-71At5g2029040S ribosomal protein S8 (RPS8A)O.I.H.G.S.X.
0.2329.9Gma.6138.1.S1_atAt1g10522--4e+0At1g16040-O.I.H.G.S.X.
0.2329.9Gma.11768.1.S1_atAt1g10522--8e+0At5g52960unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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