Co-expression analysis

Gene ID	Ta.7591.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g37760: SQE3 (squalene epoxidase 3) (HF=2e-8)
Module size	6 genes
NF	0.06
%ile	15.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.93	Ta.7591.1.S1_at	CD872021	-	-	2e-8	At4g37760	SQE3 (squalene epoxidase 3)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.92	TaAffx.65248.1.A1_at	BJ254955	-	-	3e-1	At1g69720	ho3 (HEME OXYGENASE 3)	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.96	Ta.3336.1.S1_x_at	BJ260197	-	-	1e+0	At5g28630	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.95	Ta.27044.1.S1_at	BJ263152	-	-	2e-1	At1g67070	DIN9 (DARK INDUCIBLE 9)	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.96	Ta.28745.1.S1_x_at	CK200152	-	-	2e-14	At1g01090	PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA)	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.96	Ta.3560.1.S1_s_at	BJ318088	-	-	2e-4	At3g47810	MAG1 (MAIGO 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.5	99.6	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
12.7	99.4	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
12.4	99.4	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.1	98.8	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
7.5	98.6	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.2	98.5	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
6.0	98.0	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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