Co-expression analysis

Gene ID Ta.7493.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g53050: galactose-binding lectin family protein (HF=2e+0)
Module size 6 genes
NF 0.60
%ile 86.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.00.96Ta.7493.1.S1_atCK205703--2e+0At3g53050galactose-binding lectin family proteinO.I.H.G.S.X.
0.6383.10.95Ta.8051.1.S1_atCK168230--3e+0At5g23310FSD3 (FE SUPEROXIDE DISMUTASE 3)O.I.H.G.S.X.
0.6081.00.96TaAffx.112322.1.S1_atCA706806--4e+0At4g32208-O.I.H.G.S.X.
0.5576.80.97TaAffx.53324.1.S1_x_atCA693604--9e+0At4g09070-O.I.H.G.S.X.
0.4767.90.96Ta.12083.1.A1_atCD885615--1e+0At5g17470calmodulin-related protein, putativeO.I.H.G.S.X.
0.3651.90.97Ta.25402.1.S1_atCK160504--4e-42At1g11430plastid developmental protein DAG, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.099.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.799.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.598.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.398.6GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.498.2GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.498.2GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.997.3GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.096.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM324484Si- B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.595.4GSM324492Si+ B- rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.212244.1.S1_at, orthologous to the query gene, Ta.7493.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9599.7PtpAffx.212244.1.S1_atAt3g53050hypothetical protein-4e-6At3g03710RIF10 (resistant to inhibition with FSM 10)O.I.H.G.S.X.
0.5480.8PtpAffx.202334.1.S1_atAt3g53050hypothetical protein-2e-12At1g02910LPA1 (LOW PSII ACCUMULATION1)O.I.H.G.S.X.
0.5279.4PtpAffx.29788.1.S1_atAt3g53050hypothetical protein-8e-68At5g13410immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.5078.6PtpAffx.59037.1.S1_atAt3g53050--1e-10At3g215001-deoxy-D-xylulose-5-phosphate synthaseO.I.H.G.S.X.
0.4167.7PtpAffx.156635.1.S1_atAt3g53050--2e-17At4g15510photosystem II reaction center PsbP family proteinO.I.H.G.S.X.
0.4067.0PtpAffx.5585.1.S1_atAt3g53050hypothetical protein-3e-24At4g27700rhodanese-like domain-containing proteinO.I.H.G.S.X.
0.3863.7PtpAffx.63611.1.A1_atAt3g53050--1e-9At4g12830hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.3863.7PtpAffx.206920.1.S1_atAt3g53050hypothetical protein-9e-60At2g43560immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.3863.7Ptp.5269.1.S1_a_atAt3g53050hypothetical protein-5e-32At1g67700unknown proteinO.I.H.G.S.X.
0.3661.6PtpAffx.51608.1.A1_atAt3g53050hypothetical protein-7e-35At3g11945homogentisate farnesyltransferase/ homogentisate geranylgeranyltransferase/ homogentisate solanesyltransferaseO.I.H.G.S.X.
0.3661.6PtpAffx.85178.1.S1_atAt3g53050hypothetical protein-1e-28At4g29590methyltransferaseO.I.H.G.S.X.
0.3559.7PtpAffx.3617.1.A1_a_atAt3g53050--1e-7At5g14260SET domain-containing proteinO.I.H.G.S.X.
0.3559.7PtpAffx.55811.1.A1_atAt3g53050hypothetical protein-2e-40At2g41680NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C)O.I.H.G.S.X.
0.3458.3PtpAffx.16652.1.S1_atAt3g53050hypothetical protein-2e-1At1g6000029 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putativeO.I.H.G.S.X.
0.3357.5PtpAffx.5585.1.S1_a_atAt3g53050hypothetical protein-3e-24At4g27700rhodanese-like domain-containing proteinO.I.H.G.S.X.
0.3255.2PtpAffx.26613.1.S1_atAt3g53050hypothetical protein-9e-52At4g18480CHLI1O.I.H.G.S.X.
0.3255.2PtpAffx.128497.1.S1_atAt3g53050hypothetical protein-4e-64At4g29060emb2726 (embryo defective 2726)O.I.H.G.S.X.
0.2950.5PtpAffx.202319.1.S1_atAt3g53050hypothetical protein-4e-14At2g46910plastid-lipid associated protein PAP / fibrillin family proteinO.I.H.G.S.X.
0.2850.5PtpAffx.3980.1.S1_s_atAt3g53050hypothetical protein-1e-98At5g30510RPS1 (RIBOSOMAL PROTEIN S1)O.I.H.G.S.X.
0.2645.2PtpAffx.202190.1.S1_atAt3g53050hypothetical protein-4e-32At3g61080fructosamine kinase family proteinO.I.H.G.S.X.
0.2645.2PtpAffx.3787.2.S1_a_atAt3g53050inner membrane protein /// inner membrane protein-4e-22At2g28800ALB3 (ALBINO 3)O.I.H.G.S.X.
0.2645.2PtpAffx.57129.1.A1_atAt3g53050hypothetical protein-5e+0At5g28050cytidine/deoxycytidylate deaminase family proteinO.I.H.G.S.X.
0.2543.6PtpAffx.14324.1.S1_atAt3g53050hypothetical protein-3e-5At4g23890unknown proteinO.I.H.G.S.X.
0.2441.8Ptp.2754.1.A1_a_atAt3g53050hypothetical protein-2e-28At1g13270MAP1C (METHIONINE AMINOPEPTIDASE 1B)O.I.H.G.S.X.
0.2340.5Ptp.2552.1.S1_s_atAt3g53050hypothetical protein-5e-35At1g74470geranylgeranyl reductaseO.I.H.G.S.X.
0.2340.5PtpAffx.203180.1.S1_s_atAt3g53050hypothetical protein-8e-125At1g62750SCO1 (SNOWY COTYLEDON 1)O.I.H.G.S.X.
0.2136.5PtpAffx.159299.1.A1_atAt3g53050hypothetical protein-7e+0At5g59180NRPB7O.I.H.G.S.X.
0.2136.5PtpAffx.209619.1.S1_atAt3g53050hypothetical protein-1e-121At4g04350EMB2369 (EMBRYO DEFECTIVE 2369)O.I.H.G.S.X.
0.2034.6Ptp.5722.1.S1_atAt3g53050hypothetical protein-2e-15At1g64510ribosomal protein S6 family proteinO.I.H.G.S.X.
0.2034.6Ptp.1219.2.S1_s_atAt3g53050hypothetical protein-7e-22At3g56940CRD1 (COPPER RESPONSE DEFECT 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Vitis_vinifera
Zea_mays



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