Co-expression analysis

Gene ID	Ta.7428.2.A1_a_at
Gene name
Homology with Arabidopsis	Similar to At3g04780: - (HF=2e+0)
Module size	6 genes
NF	0.49
%ile	74.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.97	Ta.7428.2.A1_a_at	CA736575	-	-	2e+0	At3g04780	-	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.96	Ta.7273.3.A1_at	CA605537	-	-	4e+0	At2g38150	transferase/ transferase, transferring glycosyl groups	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.9217.1.S1_at	BT009612.1	-	-	1e-1	At2g22490	CYCD2	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	TaAffx.76554.1.A1_at	BJ307578	-	-	1e+0	At5g54320	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.5909.3.A1_x_at	BJ298528	-	-	7e+0	At4g27350	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.96	TaAffx.38259.1.S1_at	BJ242900	-	-	6e+0	At5g67450	AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.6	98.3	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.1	98.1	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.6	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0	97.4	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.0	97.4	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.9	97.3	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9	97.3	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.5	96.9	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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