Co-expression analysis

Gene ID Ta.7422.3.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At5g20520: WAV2 (WAVY GROWTH 2) (HF=6e-5)
Module size 6 genes
NF 0.64
%ile 89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.40.98Ta.7422.3.S1_a_atCA593775--6e-5At5g20520WAV2 (WAVY GROWTH 2)O.I.H.G.S.X.
0.7389.10.97TaAffx.77664.1.S1_atCA744550--2e-58At5g67380CKA1 (CASEIN KINASE ALPHA 1)O.I.H.G.S.X.
0.7389.10.97Ta.9175.2.S1_a_atCA606017--1e-6At1g50370serine/threonine protein phosphatase, putativeO.I.H.G.S.X.
0.6786.30.97Ta.1348.3.S1_a_atCA662224--1e-12At5g4562026S proteasome regulatory subunit, putative (RPN9)O.I.H.G.S.X.
0.5072.40.97Ta.7011.2.S1_a_atCA636224--1e-9At2g22310ATUBP4 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 4)O.I.H.G.S.X.
0.3346.90.98Ta.7299.2.S1_a_atCA605243--5e-12At2g44100ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.097.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM111217genotype D15 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.793.3GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.592.5GSM111229genotype B65 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.592.5GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.492.0GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.291.0GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.190.3GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.190.3GSM111239genotype A91 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.190.3GSM314265tissue type: seedling, crown - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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