Co-expression analysis

Gene ID	Ta.7422.3.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At5g20520: WAV2 (WAVY GROWTH 2) (HF=6e-5)
Module size	6 genes
NF	0.64
%ile	89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.4	0.98	Ta.7422.3.S1_a_at	CA593775	-	-	6e-5	At5g20520	WAV2 (WAVY GROWTH 2)	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.97	TaAffx.77664.1.S1_at	CA744550	-	-	2e-58	At5g67380	CKA1 (CASEIN KINASE ALPHA 1)	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.97	Ta.9175.2.S1_a_at	CA606017	-	-	1e-6	At1g50370	serine/threonine protein phosphatase, putative	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.1348.3.S1_a_at	CA662224	-	-	1e-12	At5g45620	26S proteasome regulatory subunit, putative (RPN9)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.7011.2.S1_a_at	CA636224	-	-	1e-9	At2g22310	ATUBP4 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 4)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.98	Ta.7299.2.S1_a_at	CA605243	-	-	5e-12	At2g44100	ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.0	97.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM111217	genotype D15 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.7	93.3	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM111229	genotype B65 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.5	92.5	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.2	91.0	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.1	90.3	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.1	90.3	GSM111239	genotype A91 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.1	90.3	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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