Co-expression analysis

Gene ID Ta.7416.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g63530: ATFP3 (HF=2e+0)
Module size 14 genes
NF 0.36
%ile 58.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6282.30.97Ta.7416.1.A1_atBJ265665--2e+0At5g63530ATFP3O.I.H.G.S.X.
0.6483.60.97TaAffx.9320.1.S1_atBJ250015--3e-1At5g14105unknown proteinO.I.H.G.S.X.
0.4666.80.98Ta.9383.1.S1_a_atBQ483833--6e-4At2g37160transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.4464.50.97Ta.9068.1.S1_atBJ320264--8e-8At4g12610transcription initiation factor IIF alpha subunit (TFIIF-alpha) family proteinO.I.H.G.S.X.
0.4260.90.97TaAffx.63964.1.S1_atBJ322405--4e-1At3g19950zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4159.60.97Ta.128.1.S1_atU76747.1Tap-5e+0At5g46730glycine-rich proteinO.I.H.G.S.X.
0.3956.10.98Ta.9387.1.S1_atBJ251341--9e-23At2g31510IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7)O.I.H.G.S.X.
0.3956.10.98Ta.14582.1.S1_atCK209915--1e-9At5g53850haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.2939.20.98Ta.2803.1.S1_atBJ322551--1e+0At5g46030unknown proteinO.I.H.G.S.X.
0.2839.20.98TaAffx.20403.1.S1_atCA684279--7e-1At1g36925unknown proteinO.I.H.G.S.X.
0.2735.60.97Ta.11079.2.S1_atCA655580--4e+0At3g59430unknown proteinO.I.H.G.S.X.
0.2125.50.97Ta.25749.1.A1_atCD373752--8e-18At5g13010EMB3011 (embryo defective 3011)O.I.H.G.S.X.
0.2125.50.97Ta.3448.1.S1_atCK206881--6e-1At3g04560unknown proteinO.I.H.G.S.X.
0.2125.50.98Ta.7599.1.S1_a_atBJ219890--4e-15At1g60170emb1220 (embryo defective 1220)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.199.5GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
10.999.3GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.898.9GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.498.6GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.396.7GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.294.8GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.194.5GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.994.0GSM246386SB169_Stem_ rep1_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stemLink to GEO
2.793.3GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.492.0GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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