Co-expression analysis

Gene ID Ta.7341.1.S1_at
Gene name hypothetical LOC542956
Homology with ArabidopsisSimilar to At1g65960: GAD2 (GLUTAMATE DECARBOXYLASE 2) (HF=6e-33)
Module size 12 genes
NF 0.32
%ile 51.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8894.40.94Ta.7341.1.S1_atCD892913hypothetical LOC542956-6e-33At1g65960GAD2 (GLUTAMATE DECARBOXYLASE 2)O.I.H.G.S.X.
0.5879.20.94Ta.9576.1.S1_atCA598444--7e+0At5g65080MAF5 (MADS AFFECTING FLOWERING 5)O.I.H.G.S.X.
0.4159.60.94Ta.10891.1.S1_atCD924109--4e-1At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)O.I.H.G.S.X.
0.4058.40.93Ta.15084.1.S1_atCA689471--4e+0At5g38630ACYB-1O.I.H.G.S.X.
0.3651.90.94Ta.4419.1.S1_atCK193073--3e-6At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)O.I.H.G.S.X.
0.3549.80.93Ta.4419.3.S1_a_atCA638497--3e-1At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)O.I.H.G.S.X.
0.3040.90.95Ta.3922.1.S1_atCD454673--3e-6At5g22300NIT4 (NITRILASE 4)O.I.H.G.S.X.
0.2939.20.96Ta.11853.1.S1_atCA679722--1e-2At3g48630unknown proteinO.I.H.G.S.X.
0.2839.20.94TaAffx.25219.1.S1_atCA704428--6e+0At5g20160ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinO.I.H.G.S.X.
0.2430.30.96Ta.6113.1.S1_a_atCA668966--3e+0At5g22300NIT4 (NITRILASE 4)O.I.H.G.S.X.
0.1922.40.95Ta.18649.1.S1_atCD912605--6e-4At4g25570ACYB-2O.I.H.G.S.X.
0.1213.30.95Ta.14119.2.S1_a_atCA653400--4e-3At5g47330palmitoyl protein thioesterase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.899.1GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
8.999.0GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.898.7GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.598.3GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.998.0GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.597.8GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.297.5GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.997.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.897.2GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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