Co-expression analysis

Gene ID Ta.7274.3.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At1g79650: RAD23 (HF=1e-3)
Module size 6 genes
NF 0.69
%ile 92.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.40.97Ta.7274.3.S1_a_atAJ612375--1e-3At1g79650RAD23O.I.H.G.S.X.
0.6786.30.97Ta.1286.2.S1_x_atBQ606415--4e+0At5g61412unknown proteinO.I.H.G.S.X.
0.6081.00.97Ta.30799.3.S1_a_atCA720672--6e-2At5g54580RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.5576.80.97TaAffx.91476.1.S1_atBJ316914--7e-5At3g17590BSH (BUSHY GROWTH)O.I.H.G.S.X.
0.5072.40.97TaAffx.77390.1.S1_atCD893386histone deacetylase-1e-19At5g63110HDA6 (HISTONE DEACETYLASE 6)O.I.H.G.S.X.
0.5072.40.97Ta.2207.2.S1_a_atCA612248--5e-25At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.3GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
4.897.2GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.697.0GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.196.4GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM298093Crown tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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