Co-expression analysis

Gene ID	Ta.7252.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g45430: protein kinase, putative (HF=1e-10)
Module size	6 genes
NF	0.19
%ile	33.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	93.4	0.95	Ta.7252.2.S1_at	BQ619846	-	-	1e-10	At5g45430	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.95	Ta.7252.1.A1_x_at	CK205929	-	-	8e+0	At4g11430	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.96	Ta.7070.1.S1_a_at	CA622560	-	-	1e+0	At5g65410	HB25 (HOMEOBOX PROTEIN 25)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.95	Ta.18131.1.S1_at	CA629780	-	-	7e+0	At3g30391	unknown protein	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.97	Ta.2264.1.S1_s_at	BQ162633	-	-	4e-29	At3g26670	-	O.I.	H.G.	S.X.	Please select
0.05	6.7	0.96	Ta.12251.3.S1_x_at	BU100837	-	-	8e-1	At5g47210	nuclear RNA-binding protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.0	99.0	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.9	98.7	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.2	96.6	GSM143502	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.2	96.6	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.8	96.0	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM143516	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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