Co-expression analysis

Gene ID	Ta.7176.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g05690: CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF) (HF=2e+0)
Module size	6 genes
NF	0.42
%ile	67.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.98	Ta.7176.1.S1_at	CD490871	-	-	2e+0	At5g05690	CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.22913.1.S1_at	CA715053	-	-	1e+1	At5g61200	-	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.97	Ta.938.2.S1_x_at	CK216073	-	-	9e-2	At1g71950	identical protein binding / serine-type endopeptidase	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.97	Ta.1602.1.S1_at	CA721317	-	-	2e+0	At5g55200	co-chaperone grpE protein, putative	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.97	Ta.6290.1.S1_at	BJ301403	-	-	1e-10	At1g49010	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.98	Ta.829.1.S1_at	BJ283440	-	-	2e-47	At1g14400	UBC1 (UBIQUITIN CARRIER PROTEIN 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.0	98.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
4.0	96.3	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.2	94.8	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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