Co-expression analysis

Gene ID	Ta.7089.1.S1_at
Gene name	casein kinase-like protein
Homology with Arabidopsis	Similar to At3g13670: protein kinase family protein (HF=2e-13)
Module size	6 genes
NF	0.57
%ile	83.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	74.9	0.98	Ta.7089.1.S1_at	CD872336	casein kinase-like protein	-	2e-13	At3g13670	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.98	Ta.7065.1.S1_at	BJ254686	-	-	4e-43	At3g03940	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.98	Ta.9383.1.S1_a_at	BQ483833	-	-	6e-4	At2g37160	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.98	Ta.11781.1.A1_at	BQ170788	-	-	7e+0	At4g29170	ATMND1	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.2438.1.S1_at	CD903064	-	-	1e+0	At1g29830	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	TaAffx.20403.1.S1_at	CA684279	-	-	7e-1	At1g36925	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.1	99.6	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
5.2	97.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.6	97.0	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.5	96.9	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.2	96.6	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.9	96.1	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.7	95.8	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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