Co-expression analysis

Gene ID Ta.7054.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g26730: zinc finger (C3HC4-type RING finger) family protein (HF=2e-12)
Module size 15 genes
NF 0.52
%ile 78.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6583.90.94Ta.7054.2.S1_atBJ245931--2e-12At3g26730zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.7288.30.96Ta.4045.2.S1_atBJ257600--6e+0At4g37090unknown proteinO.I.H.G.S.X.
0.6986.90.96Ta.1582.2.S1_atBJ293526--4e+0At2g15930unknown proteinO.I.H.G.S.X.
0.6786.30.95TaAffx.114922.1.S1_atCA726912--7e-2At5g17650glycine/proline-rich proteinO.I.H.G.S.X.
0.6583.90.96Ta.10462.2.S1_atBJ269353--2e-28At1g17720ATB BETAO.I.H.G.S.X.
0.6182.00.96Ta.7558.3.S1_a_atBQ609768--3e-1At4g12060Clp amino terminal domain-containing proteinO.I.H.G.S.X.
0.5374.90.96Ta.24123.2.S1_atBE517942--6e+0At5g51900cytochrome P450 familyO.I.H.G.S.X.
0.5273.70.96Ta.4582.2.S1_a_atCA662815--4e+0At3g54260unknown proteinO.I.H.G.S.X.
0.5273.70.96Ta.4226.2.S1_atBJ256146--1e-7At2g26920ubiquitin-associated (UBA)/TS-N domain-containing proteinO.I.H.G.S.X.
0.5072.40.96Ta.9034.2.S1_atBJ235279--7e+0At5g06510NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10)O.I.H.G.S.X.
0.4869.00.96TaAffx.77786.1.S1_atCA742947--4e+0At5g17360-O.I.H.G.S.X.
0.4260.90.96TaAffx.81976.1.S1_s_atCA679498--1e+0At4g24950unknown proteinO.I.H.G.S.X.
0.4260.90.96TaAffx.91705.1.S1_atBJ306004--7e-2At3g09250DNA binding / nucleaseO.I.H.G.S.X.
0.3448.10.96TaAffx.97428.1.S1_atBQ281681--2e+0At1g55140RNA binding / ribonuclease IIIO.I.H.G.S.X.
0.2839.20.96TaAffx.118885.1.S1_atCA679946--2e+0At5g01400ESP4 (ENHANCED SILENCING PHENOTYPE 4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.996.1GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.896.0GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.795.8GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.695.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM139912Anther pre-meiosis rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.294.8GSM139924Anther telophaseI-telophaseII rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM139916Anther leptotene-pachytene rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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