Co-expression analysis

Gene ID	Ta.6968.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g53610: ATRAB8 (HF=1e-45)
Module size	9 genes
NF	0.27
%ile	43.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.82	92.7	0.97	Ta.6968.1.S1_at	CK196001	-	-	1e-45	At3g53610	ATRAB8	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.98	Ta.29525.1.S1_at	CA691279	-	-	2e-3	At1g79390	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.98	Ta.12554.1.S1_a_at	CD909877	-	-	1e+0	At2g09970	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.98	Ta.6428.1.S1_s_at	BG608133	-	-	2e-5	At5g47620	heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.98	Ta.2816.2.S1_a_at	CA747268	-	-	4e+0	At4g18650	transcription factor-related	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.98	Ta.7156.1.S1_at	CK166080	-	-	4e+0	At1g31240	DNA binding	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.98	Ta.11361.1.S1_at	CD932339	-	-	6e-1	At5g48680	sterile alpha motif (SAM) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.98	Ta.7457.1.S1_at	CK166374	-	-	3e+0	Atmg01260	-	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.98	Ta.8245.1.S1_at	CD922906	-	-	2e-35	At1g04810	26S proteasome regulatory subunit, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.2	98.1	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.2	94.8	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
2.7	93.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.5	92.5	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.3	91.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.3	91.5	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.3	91.5	GSM298088	Crown tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.2	91.0	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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