Co-expression analysis

Gene ID	Ta.6961.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g64650: - (HF=4e-34)
Module size	6 genes
NF	0.35
%ile	57.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.8	0.97	Ta.6961.1.S1_at	CA666763	-	-	4e-34	At1g64650	-	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	Ta.9005.1.S1_s_at	BQ162761	-	-	4e-6	At1g61900	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.97	Ta.9386.1.S1_at	CD938185	-	-	6e+0	At5g44080	bZIP transcription factor family protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.97	Ta.10883.1.S1_x_at	CK193711	-	-	2e-1	At5g14000	anac084 (Arabidopsis NAC domain containing protein 84)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.97	TaAffx.24357.1.S1_at	BJ310144	-	-	1e-20	At5g61240	protein binding	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.97	Ta.28022.3.S1_at	BJ217501	-	-	5e-178	At5g62690	TUB2	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
35.1	99.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.1	94.5	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8	93.6	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.7	93.3	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.5	92.5	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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