Co-expression analysis

Gene ID Ta.6945.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g09940: MDHAR (MONODEHYDROASCORBATE REDUCTASE) (HF=3e+0)
Module size 6 genes
NF 0.27
%ile 45.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.95Ta.6945.1.A1_atBJ319268--3e+0At3g09940MDHAR (MONODEHYDROASCORBATE REDUCTASE)O.I.H.G.S.X.
0.4464.50.96Ta.3322.3.S1_a_atCA649562--2e-5At4g18030dehydration-responsive family proteinO.I.H.G.S.X.
0.2532.10.95Ta.6945.1.A1_a_atBJ319268--3e+0At3g09940MDHAR (MONODEHYDROASCORBATE REDUCTASE)O.I.H.G.S.X.
0.2329.00.95Ta.3322.1.S1_s_atCK208679--4e-50At1g26850dehydration-responsive family proteinO.I.H.G.S.X.
0.1719.80.95Ta.10569.1.A1_atCK208173--1e+0At5g18590kelch repeat-containing proteinO.I.H.G.S.X.
0.1213.30.95Ta.16760.1.S1_atCA611994--6e-48At5g52920PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.597.8GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.097.4GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.396.7GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.296.6GSM139918Anther leptotene-pachytene rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.096.3GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.896.0GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.795.8GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.595.4GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.595.4GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.595.4GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig11718_at, orthologous to the query gene, Ta.6945.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5572.0Contig11718_atAt3g09940--2e-1At1g28340AtRLP4 (Receptor Like Protein 4)O.I.H.G.S.X.
0.6178.7Contig9210_atAt3g09940--1e-3At1g77350unknown proteinO.I.H.G.S.X.
0.4661.0Contig5365_s_atAt3g09940--4e-1At5g24120SIGE (SIGMA FACTOR E)O.I.H.G.S.X.
0.4356.4Contig13971_atAt3g09940--6e-4At4g29590methyltransferaseO.I.H.G.S.X.
0.4053.1rbags15h21_atAt3g09940--3e+0At3g60600VAP (VESICLE ASSOCIATED PROTEIN)O.I.H.G.S.X.
0.2732.1HA22E11r_s_atAt3g09940--3e+0At3g44755unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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