Co-expression analysis

Gene ID Ta.6932.3.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At4g30810: scpl29 (serine carboxypeptidase-like 29) (HF=5e-18)
Module size 6 genes
NF 0.53
%ile 79.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.96Ta.6932.3.S1_a_atCA647942--5e-18At4g30810scpl29 (serine carboxypeptidase-like 29)O.I.H.G.S.X.
0.5072.40.96TaAffx.83835.1.S1_atCN010146--3e-15At1g01740protein kinase family proteinO.I.H.G.S.X.
0.5072.40.96Ta.25425.2.S1_a_atBE217040--4e-5At4g08930ATAPRL6 (APR-like 6)O.I.H.G.S.X.
0.5072.40.98TaAffx.107995.1.S1_s_atCA692564--2e-2At4g38220aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putativeO.I.H.G.S.X.
0.3651.90.96TaAffx.107995.1.S1_x_atCA692564--2e-2At4g38220aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putativeO.I.H.G.S.X.
0.3040.90.96TaAffx.113489.1.S1_s_atCA653516--5e-10At3g12800SDRB (SHORT-CHAIN DEHYDROGENASE-REDUCTASE B)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
40.499.9GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
18.499.7GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
14.099.5GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.496.8GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.695.6GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM324489Si- B+ rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.495.2GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.094.3GSM250902Tc_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage