Co-expression analysis

Gene ID	Ta.6887.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g02410: cytochrome c oxidase assembly protein CtaG / Cox11 family (HF=1e-41)
Module size	8 genes
NF	0.51
%ile	76.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	87.2	0.96	Ta.6887.1.S1_at	CK197378	-	-	1e-41	At1g02410	cytochrome c oxidase assembly protein CtaG / Cox11 family	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.23196.1.S1_a_at	CD452618	-	-	3e-4	At4g34490	ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.23196.1.S1_x_at	CD452618	-	-	3e-4	At4g34490	ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	Ta.23196.3.S1_at	CA648738	-	-	1e+0	At4g34490	ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.98	Ta.1584.1.S1_x_at	BE442889	-	-	3e-18	At3g20970	NFU4	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.98	Ta.9195.3.S1_at	CA648843	-	-	3e+0	At1g78630	emb1473 (embryo defective 1473)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.98	Ta.9195.3.S1_x_at	CA648843	-	-	3e+0	At1g78630	emb1473 (embryo defective 1473)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.98	Ta.13252.1.S1_at	CD868218	-	-	2e-29	At5g13440	ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	97.6	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.6	97.0	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.7	93.3	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.6	92.9	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.3	91.5	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
2.3	91.5	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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