Co-expression analysis

Gene ID	Ta.6850.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g52210: ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1) (HF=8e-19)
Module size	6 genes
NF	0.41
%ile	65.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	76.8	0.98	Ta.6850.1.S1_at	BJ311627	-	-	8e-19	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.10486.1.S1_at	BQ172361	-	-	1e-2	At4g10010	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.5090.1.S1_x_at	CK168310	-	-	4e-25	At5g11980	conserved oligomeric Golgi complex component-related / COG complex component-related	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.6435.1.S1_a_at	CK195702	-	-	8e-1	At2g30810	gibberellin-regulated family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.10271.1.S1_at	CK209140	-	-	8e-21	At1g75850	VPS35B (VPS35 HOMOLOG B)	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.98	Ta.9972.1.S1_at	BQ161449	-	-	1e-2	At2g30100	ubiquitin family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.5	99.8	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
18.9	99.7	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
18.5	99.7	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
7.3	98.6	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
6.7	98.4	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM111174	genotype G30 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.9	94.0	GSM111241	genotype F82 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.6	92.9	GSM111235	genotype F44 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.6	92.9	GSM111238	genotype A91 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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