Co-expression analysis

Gene ID	Ta.684.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g06460: ATUBA2 (HF=3e-24)
Module size	7 genes
NF	0.39
%ile	63.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	89.8	0.96	Ta.684.1.S1_at	M90664.1	-	-	3e-24	At5g06460	ATUBA2	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.713.1.A1_x_at	CD914558	-	-	4e-1	At5g18820	EMB3007 (embryo defective 3007)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.99	Ta.713.1.A1_at	CD914558	-	-	4e-1	At5g18820	EMB3007 (embryo defective 3007)	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.99	Ta.713.2.S1_x_at	BG262446	-	-	4e-25	At2g28000	CPN60A (CHAPERONIN-60ALPHA)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.98	Ta.12123.1.S1_at	BQ171638	-	-	7e-32	At5g56280	CSN6A	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.97	Ta.6252.2.S1_a_at	CK211615	-	-	1e+0	At4g22240	plastid-lipid associated protein PAP, putative	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.98	Ta.29627.1.A1_at	BQ281547	-	-	8e-38	At1g22920	CSN5A (COP9 SIGNALOSOME 5A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.3	99.5	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.7	99.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.2	99.0	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.0	98.8	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.9	96.1	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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