Co-expression analysis

Gene ID Ta.6789.2.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At1g07410: ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B) (HF=1e-18)
Module size 8 genes
NF 0.25
%ile 41.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6483.60.92Ta.6789.2.S1_x_atBJ225484--1e-18At1g07410ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)O.I.H.G.S.X.
0.3244.40.94Ta.3856.3.S1_a_atCA629836--2e-17At4g26610D6PKL1 (D6 PROTEIN KINASE LIKE 1)O.I.H.G.S.X.
0.2735.60.94Ta.1804.1.S1_s_atAY442329.1phytochelatin synthetase-5e-9At5g60920COB (COBRA)O.I.H.G.S.X.
0.2430.30.94Ta.993.2.S1_a_atCA604140--6e-30At1g12000pyrophosphate--fructose-6-phosphate 1-phosphotransferase beta subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putativeO.I.H.G.S.X.
0.1922.40.94Ta.9381.2.S1_atBE585886--1e+0At4g18930cyclic phosphodiesteraseO.I.H.G.S.X.
0.1821.00.94Ta.3044.2.S1_a_atBJ214058--2e-2At2g34560katanin, putativeO.I.H.G.S.X.
0.1618.20.95TaAffx.111857.1.S1_s_atCA646932--6e+0At5g14790bindingO.I.H.G.S.X.
0.1213.30.95Ta.6789.1.S1_a_atCK205743--2e-6At1g09630ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.998.0GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.697.8GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.697.8GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.297.5GSM139912Anther pre-meiosis rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.197.5GSM139924Anther telophaseI-telophaseII rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.797.1GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.797.1GSM139921Anther diplotene-anaphaseI rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.697.0GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.596.9GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.096.3GSM139919Anther diplotene-anaphaseI rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage