Co-expression analysis

Gene ID Ta.6762.3.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g61490: - (HF=1e+0)
Module size 8 genes
NF 0.66
%ile 89.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8292.70.96Ta.6762.3.S1_atBJ246546--1e+0At5g61490-O.I.H.G.S.X.
0.8092.20.96Ta.6759.2.S1_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.6182.00.96Ta.6759.2.S1_x_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.5576.80.96TaAffx.85941.1.S1_atCA618291--2e+1At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.5576.80.96TaAffx.51594.1.S1_atCA723204--1e+0At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)O.I.H.G.S.X.
0.5374.90.96TaAffx.6157.1.S1_atCA690748--4e+0At2g42930glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.5374.90.96Ta.21581.1.S1_atCA696527--4e+0At2g36460fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.5072.40.96Ta.18019.2.S1_atCA625748--1e+0At1g32700zinc-binding family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.999.8GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
20.399.7GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
13.099.4GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
10.199.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.998.7GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.898.4GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.798.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.198.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.697.8GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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