Co-expression analysis

Gene ID Ta.6733.2.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g16070: chaperonin, putative (HF=2e-35)
Module size 6 genes
NF 0.55
%ile 81.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5374.90.98Ta.6733.2.S1_x_atCD888689--2e-35At5g16070chaperonin, putativeO.I.H.G.S.X.
0.7389.10.99Ta.1648.2.A1_x_atCA606613--8e-23At3g18190chaperonin, putativeO.I.H.G.S.X.
0.6182.00.98Ta.6282.1.S1_a_atBJ249264--1e-4At5g53480importin beta-2, putativeO.I.H.G.S.X.
0.6081.00.99Ta.1648.3.A1_x_atBQ162378--8e-8At3g18190chaperonin, putativeO.I.H.G.S.X.
0.5072.40.98Ta.7893.1.S1_atCD928189--2e+0At3g6077040S ribosomal protein S13 (RPS13A)O.I.H.G.S.X.
0.3448.10.98Ta.30947.1.S1_s_atCK156655--5e-15At5g25754unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.496.8GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.795.8GSM298062Crown tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM298061Crown tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM298059Crown tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.495.2GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM298060Crown tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.994.0GSM139929Anther immature pollen rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.994.0GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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