Co-expression analysis

Gene ID Ta.6699.1.S1_at
Gene name pre-alpha-/beta-gliadin A-III
Homology with ArabidopsisSimilar to At1g49010: myb family transcription factor (HF=2e-1)
Module size 6 genes
NF 0.57
%ile 83.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.21.00Ta.6699.1.S1_atM11076.1pre-alpha-/beta-gliadin A-III-2e-1At1g49010myb family transcription factorO.I.H.G.S.X.
0.8393.41.00Ta.28846.1.S1_x_atBQ609183low-molecular-weight glutenin subunit /// low molecular weight glutenin /// low molecular weight glutenin /// low molecular weight glutenin /// low molecular weight glutenin /// low molecular weight glutenin /// low molecular weight glutenin-8e-2At3g42150unknown proteinO.I.H.G.S.X.
0.6786.31.00Ta.14625.2.S1_x_atBQ806669--2e-1At5g18550nucleic acid binding / zinc ion bindingO.I.H.G.S.X.
0.5374.91.00Ta.1304.1.S1_atCA717552serine proteinase inhibitor-like allergen-6e+0At2g47690NADH-ubiquinone oxidoreductase-relatedO.I.H.G.S.X.
0.4767.91.00Ta.14625.1.S1_x_atBJ242520lmw-gs-3e+0At3g20865AGP40 (arabinogalactan-protein 40)O.I.H.G.S.X.
0.2839.21.00Ta.24114.11.S1_x_atBJ237788Alpha/beta-gliadin precursor-3e+0At5g53590auxin-responsive family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
42.699.9GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
40.899.9GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
39.899.9GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.592.5GSM324485Si- B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
2.592.5GSM324491Si+ B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
2.492.0GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
2.492.0GSM324493Si+ B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
2.492.0GSM324495Si+ B+ rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
2.190.3GSM324486Si- B- rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
2.089.7GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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