Co-expression analysis

Gene ID	Ta.6698.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g50590: nucleotide binding (HF=2e-9)
Module size	6 genes
NF	0.29
%ile	46.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.97	Ta.6698.1.S1_at	CK200349	-	-	2e-9	At3g50590	nucleotide binding	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.98	Ta.9301.1.S1_at	CK200112	-	-	4e-25	At1g14670	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.98	Ta.25808.1.S1_at	CD374029	-	-	2e+0	At3g55530	SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.98	Ta.12924.1.S1_at	CK157382	-	-	2e-4	At1g50500	HIT1 (HEAT-INTOLERANT 1)	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.98	Ta.9581.1.S1_x_at	CD920981	-	-	2e+0	At4g40011	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.97	Ta.23259.3.A1_a_at	CA725169	-	-	9e-1	At1g24062	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.9	99.7	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
20.7	99.7	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
20.5	99.7	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.9	96.1	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.3	95.0	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9	94.0	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.9	94.0	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9	94.0	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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