Co-expression analysis

Gene ID	Ta.6591.3.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At1g73910: ATARP4A (Actin-related proteins 4A) (HF=1e+0)
Module size	7 genes
NF	0.16
%ile	29.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.92	98.5	0.95	Ta.6591.3.S1_x_at	CA646755	-	-	1e+0	At1g73910	ATARP4A (Actin-related proteins 4A)	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.98	Ta.6591.3.S1_a_at	CA646755	-	-	1e+0	At1g73910	ATARP4A (Actin-related proteins 4A)	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.97	Ta.6591.2.S1_x_at	CK193094	-	-	1e-5	At2g33470	GLTP1 (glycolipid transfer protein 1)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.98	Ta.6591.1.S1_at	CA709047	-	-	6e-4	At2g33470	GLTP1 (glycolipid transfer protein 1)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.28673.1.S1_at	BJ286336	Vacuolar ATPase subunit F	-	3e-15	At4g02620	vacuolar ATPase subunit F family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.4403.1.S1_at	BJ283628	-	-	1e-41	At2g25610	H+-transporting two-sector ATPase, C subunit family protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.96	Ta.9068.1.S1_at	BJ320264	-	-	8e-8	At4g12610	transcription initiation factor IIF alpha subunit (TFIIF-alpha) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.8	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM139915	Anther pre-meiosis rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.2	91.0	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
2.1	90.3	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.1	90.3	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
2.0	89.7	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
2.0	89.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.0	89.7	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
1.9	88.9	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
1.8	88.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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