Co-expression analysis

Gene ID	Ta.641.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g20616: unknown protein (HF=3e-1)
Module size	7 genes
NF	0.60
%ile	86.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.1	0.94	Ta.641.2.S1_at	BJ257632	-	-	3e-1	At2g20616	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.94	TaAffx.109581.3.S1_s_at	CA671445	-	-	2e-19	At4g26860	pyridoxal phosphate binding	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.96	Ta.22659.2.A1_at	CA606185	-	-	3e-10	At5g61670	-	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.93	TaAffx.105405.1.S1_at	CA734836	-	-	2e+0	At5g55570	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.94	Ta.25590.2.A1_at	CA635905	-	-	4e-3	At1g22850	-	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.94	TaAffx.82046.1.S1_at	CA636246	-	-	5e+0	At4g35320	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.94	Ta.28228.2.S1_at	CA633922	-	-	1e-6	At1g62750	SCO1 (SNOWY COTYLEDON 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
26.0	99.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
10.4	99.2	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.1	98.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3	97.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7	97.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.2	96.6	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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