Co-expression analysis

Gene ID Ta.641.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g19660: wound-responsive family protein (HF=7e-4)
Module size 39 genes
NF 0.49
%ile 75.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9398.70.95Ta.641.1.S1_atBG906659--7e-4At1g19660wound-responsive family proteinO.I.H.G.S.X.
0.6886.50.97Ta.23163.1.A1_atCK216129--3e-1At1g06770DRIP1 (DREB2A-INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.6182.00.98Ta.12065.1.S1_atBQ171511--2e+0At3g45000VPS24.2O.I.H.G.S.X.
0.6182.00.97Ta.568.1.S1_atBG908569--1e-24At2g13360AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE)O.I.H.G.S.X.
0.6081.00.97Ta.27772.1.S1_atCK214105--4e-9At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.
0.5879.20.97TaAffx.30393.1.S1_atCA624950--2e-12At2g47910CRR6 (chlororespiratory reduction 6)O.I.H.G.S.X.
0.5879.20.97Ta.1147.3.S1_atBG908516--2e+1At5g41420unknown proteinO.I.H.G.S.X.
0.5779.20.98Ta.28197.1.S1_atBQ620267--2e-60At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.
0.5678.60.96Ta.21717.2.S1_atCA683130--4e+0At3g61090unknown proteinO.I.H.G.S.X.
0.5678.60.97Ta.28775.1.S1_x_atCA680217--5e-39At1g68010HPRO.I.H.G.S.X.
0.5576.80.97TaAffx.84810.1.S1_x_atCA725328--2e-1At1g01820PEX11C (PEROXIN 11C)O.I.H.G.S.X.
0.5576.80.97Ta.2742.3.S1_a_atBE418741--2e-3At4g22890PGR5-LIKE AO.I.H.G.S.X.
0.5576.80.97Ta.2742.3.S1_x_atBE418741--2e-3At4g22890PGR5-LIKE AO.I.H.G.S.X.
0.5374.90.97Ta.1147.2.S1_a_atCA599073--8e+0At4g18692unknown proteinO.I.H.G.S.X.
0.5374.90.98Ta.1147.2.S1_x_atCA599073--8e+0At4g18692unknown proteinO.I.H.G.S.X.
0.5273.70.98Ta.10718.1.S1_atBQ166350--2e+0At5g54460wound-responsive protein-relatedO.I.H.G.S.X.
0.5173.00.97Ta.1147.3.S1_x_atBG908516--2e+1At5g41420unknown proteinO.I.H.G.S.X.
0.5173.00.96TaAffx.55881.1.S1_x_atCA744754--2e-2At2g47910CRR6 (chlororespiratory reduction 6)O.I.H.G.S.X.
0.5072.40.97Ta.9308.2.S1_x_atBE411983--2e+0At3g61070PEX11EO.I.H.G.S.X.
0.4969.70.96TaAffx.122788.1.S1_atCK212259--2e+0At5g16450dimethylmenaquinone methyltransferase family proteinO.I.H.G.S.X.
0.4869.00.97TaAffx.217.2.S1_atCA703449--2e-20At1g68830STN7 (Stt7 homolog STN7)O.I.H.G.S.X.
0.4869.00.97Ta.442.1.S1_atD86327.1catalase-1e-27At4g35090CAT2 (CATALASE 2)O.I.H.G.S.X.
0.4869.00.97Ta.9229.1.S1_x_atCK163729--2e-32At5g62790DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE)O.I.H.G.S.X.
0.4767.90.98Ta.13544.1.S1_a_atCK215541--8e-3At5g21430DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.4767.90.97Ta.4095.1.A1_atCK215296--6e-3At4g31530binding / catalyticO.I.H.G.S.X.
0.4666.80.98Ta.2742.2.S1_a_atCA619164--7e+0At5g46795MSP2 (microspore-specific promoter 2)O.I.H.G.S.X.
0.4666.80.96Ta.2431.1.S1_x_atBG905732--4e-5At3g48420haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.4464.50.98Ta.5590.1.S1_x_atCK213247--1e+0At1g37140MCT1 (mei2 C-Terminal RRM only like 1)O.I.H.G.S.X.
0.4464.50.97Ta.2431.1.S1_atBG905732--4e-5At3g48420haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.4362.20.97Ta.8050.1.S1_atBQ161186--5e+0At3g05625bindingO.I.H.G.S.X.
0.4260.90.97Ta.981.1.S1_a_atCD884037--3e+0At1g15980NDF1 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1)O.I.H.G.S.X.
0.4159.60.97Ta.28435.1.S1_atCD874594--7e+0At4g25950VATG3 (vacuolar ATP synthase G3)O.I.H.G.S.X.
0.4159.60.97Ta.8219.1.S1_atCD877084--2e+0At5g13850NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)O.I.H.G.S.X.
0.4058.40.97Ta.22598.1.S1_s_atCD891176--4e-11At2g23390-O.I.H.G.S.X.
0.3956.10.97Ta.981.2.S1_atBQ171754--5e+0At4g11760LCR17 (Low-molecular-weight cysteine-rich 17)O.I.H.G.S.X.
0.3753.00.97Ta.2737.1.S1_atCK211424--9e+0At5g23090NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13)O.I.H.G.S.X.
0.3753.00.96Ta.28409.1.A1_atBQ171522--1e-6At3g25690CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1)O.I.H.G.S.X.
0.3651.90.96Ta.27864.1.S1_atCD880477--7e-15At3g10060immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeO.I.H.G.S.X.
0.3142.70.95Ta.20847.1.S1_atCA695074--2e-2At5g13330Rap2.6L (related to AP2 6L)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.897.2GSM324491Si+ B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.596.9GSM324486Si- B- rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.596.9GSM324493Si+ B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.596.9GSM324492Si+ B- rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.996.1GSM324485Si- B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.996.1GSM324489Si- B+ rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.996.1GSM324495Si+ B+ rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.896.0GSM324484Si- B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.896.0GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.795.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage