Co-expression analysis

Gene ID Ta.6403.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g52310: protein kinase family protein / C-type lectin domain-containing protein (HF=1e-4)
Module size 6 genes
NF 0.40
%ile 64.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.40.98Ta.6403.1.S1_atBF199743--1e-4At1g52310protein kinase family protein / C-type lectin domain-containing proteinO.I.H.G.S.X.
0.5576.80.98Ta.8243.1.S1_atCA712578--4e-5At2g38630-O.I.H.G.S.X.
0.5072.40.98Ta.7098.1.S1_atCA499472--3e-1At1g53680ATGSTU28 (GLUTATHIONE S-TRANSFERASE TAU 28)O.I.H.G.S.X.
0.3651.90.98Ta.26060.1.A1_atCD453778--2e+0At2g42570unknown proteinO.I.H.G.S.X.
0.3040.90.98Ta.13356.1.S1_atAL819140--4e-1At2g25770unknown proteinO.I.H.G.S.X.
0.2532.10.98Ta.7549.1.S1_atCK167800--7e-2At1g21700ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.999.4GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
6.598.3GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.597.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.297.5GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.197.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.197.5GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.097.4GSM298074Crown tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.697.0GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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