Co-expression analysis

Gene ID Ta.6402.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g45280: SYP72 (SYNTAXIN OF PLANTS 72) (HF=2e-1)
Module size 7 genes
NF 0.61
%ile 87.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.20.98Ta.6402.1.S1_atCK151576--2e-1At3g45280SYP72 (SYNTAXIN OF PLANTS 72)O.I.H.G.S.X.
0.7389.10.98Ta.9285.2.S1_a_atCD938779--2e-14At3g27470unknown proteinO.I.H.G.S.X.
0.6786.30.98Ta.3495.1.S1_a_atBQ166285--1e+1At5g11500unknown proteinO.I.H.G.S.X.
0.6786.30.98Ta.21083.2.S1_atCA685996--5e-8At4g40100ABA-responsive protein-relatedO.I.H.G.S.X.
0.6786.30.98Ta.6642.1.S1_a_atBJ272560--1e-18At3g61760ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B)O.I.H.G.S.X.
0.5072.40.98Ta.3502.1.S1_atBJ230597--4e-15At5g19760dicarboxylate/tricarboxylate carrier (DTC)O.I.H.G.S.X.
0.3244.40.99Ta.22845.1.S1_atBJ215922tat binding protein-7e-54At1g09100RPT5B (26S proteasome AAA-ATPase subunit RPT5B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.099.4GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.598.6GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.096.3GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.896.0GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.595.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.495.2GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.294.8GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.194.5GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.893.6GSM314271tissue type: immature inflorescence - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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