Co-expression analysis

Gene ID	Ta.6357.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g62690: ATL5 (ATL5) (HF=1e+0)
Module size	6 genes
NF	0.42
%ile	66.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.90	Ta.6357.1.S1_at	BJ302894	-	-	1e+0	At3g62690	ATL5 (ATL5)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.87	Ta.18371.1.S1_at	CA635310	-	-	1e+0	At5g22180	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.87	Ta.6357.1.S1_x_at	BJ302894	-	-	1e+0	At3g62690	ATL5 (ATL5)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.88	Ta.2977.1.S1_x_at	BJ276790	-	-	1e+0	At5g59080	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.91	TaAffx.140465.1.S1_x_at	AJ614089	-	-	3e+0	At1g15215	-	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.89	TaAffx.111620.2.S1_x_at	CA636740	-	-	9e-1	At5g05090	myb family transcription factor	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.0	99.1	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
8.2	98.8	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.0	98.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.4	97.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.7	97.1	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.6	97.0	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.2	96.6	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.1	96.4	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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