Co-expression analysis

Gene ID	Ta.6342.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g15581: unknown protein (HF=1e+1)
Module size	20 genes
NF	0.33
%ile	53.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.84	93.6	0.92	Ta.6342.1.S1_at	BJ302601	-	-	1e+1	At5g15581	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.95	Ta.11620.1.S1_at	BQ170468	-	-	6e+0	At2g45150	phosphatidate cytidylyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.94	Ta.8872.1.S1_at	BQ162544	-	-	5e+0	At3g14760	unknown protein	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.95	Ta.4828.1.S1_a_at	BJ272492	-	-	2e-1	At5g66190	FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.93	Ta.9391.2.S1_a_at	CA596737	-	-	1e+0	At1g17130	cell cycle control protein-related	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.94	Ta.11906.1.S1_at	BQ171036	-	-	4e+0	At5g21274	CAM6 (CALMODULIN 6)	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.95	Ta.9391.1.S1_at	BJ274623	-	-	1e+0	At2g21810	CHP-rich zinc finger protein, putative	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.94	Ta.4828.3.S1_a_at	BJ267543	-	-	3e-1	At5g04800	40S ribosomal protein S17 (RPS17D)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.95	Ta.484.1.S1_at	BJ322416	-	-	3e+0	At5g54150	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.94	TaAffx.11832.1.S1_at	BJ321584	-	-	2e+0	At5g65260	polyadenylate-binding protein family protein / PABP family protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.95	TaAffx.43315.1.S1_at	BQ801636	-	-	6e-7	At5g05230	ubiquitin-protein ligase	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.94	Ta.25141.1.S1_at	CA616226	-	-	8e+0	At5g58330	malate dehydrogenase (NADP), chloroplast, putative	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.94	Ta.25378.1.A1_at	BJ298249	-	-	4e+0	At2g15170	-	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.95	Ta.25217.1.S1_s_at	CD454617	-	-	9e-6	At5g37350	RIO1 family protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.94	Ta.12435.1.S1_at	BQ172330	-	-	6e-1	At2g13630	F-box family protein-related	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.94	Ta.27547.1.S1_at	BT009101.1	-	-	1e-1	At3g24750	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.94	Ta.25951.1.A1_at	CD454773	-	-	2e-2	At1g22210	trehalose-6-phosphate phosphatase, putative	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.94	Ta.28593.1.S1_at	CD453834	-	-	2e+0	At3g01910	SOX (SULFITE OXIDASE)	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.95	TaAffx.2686.1.S1_at	BQ169181	-	-	1e+0	At5g63905	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.96	Ta.7823.1.S1_at	CA705869	-	-	2e+0	At5g17470	calmodulin-related protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.7	99.2	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.2	98.5	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
6.9	98.4	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
6.4	98.2	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
6.3	98.2	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
6.0	98.0	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
5.9	98.0	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.9	98.0	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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