Co-expression analysis

Gene ID Ta.6164.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g25400: - (HF=1e-1)
Module size 6 genes
NF 0.32
%ile 51.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.00.97Ta.6164.1.S1_atBJ215034--1e-1At3g25400-O.I.H.G.S.X.
0.6081.00.97Ta.9322.1.S1_atCD917669--1e-6At2g19540transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.4666.80.97TaAffx.64361.1.S1_atBJ308672--3e-1At5g26731unknown proteinO.I.H.G.S.X.
0.2430.30.97Ta.7646.1.S1_atCD907772--3e+0At4g32420peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinO.I.H.G.S.X.
0.1719.80.97Ta.7109.1.S1_a_atCD916479--7e-13At5g10070RNase L inhibitor protein-relatedO.I.H.G.S.X.
0.1213.30.97Ta.29245.2.S1_atCA612013--3e+0At4g3198560S ribosomal protein L39 (RPL39C)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.898.4GSM138185genotype C25 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
4.196.4GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.795.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM111217genotype D15 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.495.2GSM138162genotype E5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.294.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.893.6GSM138154genotype H5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.592.5GSM138164genotype D15 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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