Co-expression analysis

Gene ID Ta.6006.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g08040: unknown protein (HF=9e-34)
Module size 8 genes
NF 0.55
%ile 81.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.96Ta.6006.1.S1_atCK216649--9e-34At1g08040unknown proteinO.I.H.G.S.X.
0.6383.10.96Ta.7231.1.S1_atBJ323054--3e-1At5g64930CPR5 (CONSTITUTIVE EXPRESSION OF PR GENES 5)O.I.H.G.S.X.
0.6081.00.96Ta.5700.1.S1_atBJ287996--4e-1At1g14860atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18)O.I.H.G.S.X.
0.6081.00.96Ta.16024.1.S1_atCA738463--2e-5At1g60430ARPC3 (actin-related protein C3)O.I.H.G.S.X.
0.5879.20.96Ta.12586.1.S1_atBQ169463--7e-3At1g51040phosphatidylinositol 4-kinase, putativeO.I.H.G.S.X.
0.4767.90.96TaAffx.7979.1.S1_atBJ323090--3e-2At1g80860PLMT (PHOSPHOLIPID N-METHYLTRANSFERASE)O.I.H.G.S.X.
0.4767.90.96Ta.4995.1.S1_a_atBJ236941--3e-1At4g17730SYP23 (SYNTAXIN OF PLANTS 23)O.I.H.G.S.X.
0.4058.40.96Ta.2592.1.S1_atCK200326--7e-5At3g16480MPPalpha (mitochondrial processing peptidase alpha subunit)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.797.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
3.996.1GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.094.3GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.994.0GSM139918Anther leptotene-pachytene rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.893.6GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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