Co-expression analysis

Gene ID Ta.5909.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g51290: proline-rich family protein (HF=3e-3)
Module size 45 genes
NF 0.34
%ile 54.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9899.90.93Ta.5909.1.S1_atBJ307101--3e-3At3g51290proline-rich family proteinO.I.H.G.S.X.
0.5173.00.97Ta.28022.2.A1_atBJ309684--1e-47At5g12250TUB6 (BETA-6 TUBULIN)O.I.H.G.S.X.
0.5072.40.96Ta.23801.1.S1_atCA704514--5e+0At1g65445transferase-relatedO.I.H.G.S.X.
0.5072.40.96Ta.27708.1.S1_atD37942.1protein H2B-6-3e-15At1g07790HTB1O.I.H.G.S.X.
0.4969.70.96Ta.28055.2.S1_x_atCA705590--3e-2At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.H.G.S.X.
0.4869.00.96Ta.1441.1.S1_atCD492052--3e+0Atcg00650-O.I.H.G.S.X.
0.4869.00.96Ta.4062.1.S1_x_atCA703978--2e-1At4g38420sks9 (SKU5 Similar 9)O.I.H.G.S.X.
0.4767.90.96Ta.3246.1.S1_atBQ168896--6e+0At4g25210transcription regulatorO.I.H.G.S.X.
0.4362.20.95Ta.9534.2.A1_a_atBJ307813--5e-6At3g15380choline transporter-relatedO.I.H.G.S.X.
0.4362.20.95Ta.11256.1.A1_atBQ169714--3e-2At1g32930galactosyltransferase family proteinO.I.H.G.S.X.
0.4362.20.97Ta.27708.1.S1_x_atD37942.1protein H2B-6-3e-15At1g07790HTB1O.I.H.G.S.X.
0.4159.60.96Ta.214.1.S1_x_atCK210896beta-tubulin 5-2e-168At5g12250TUB6 (BETA-6 TUBULIN)O.I.H.G.S.X.
0.4159.60.95Ta.4062.2.A1_atCD915997--1e+0At2g01505CLE16 (CLAVATA3/ESR-RELATED 16)O.I.H.G.S.X.
0.4058.40.95Ta.13256.1.A1_a_atCD454115--2e+1At5g41210ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1)O.I.H.G.S.X.
0.3956.10.96Ta.6394.1.A1_atBJ309507--7e-15At5g37020ARF8 (AUXIN RESPONSE FACTOR 8)O.I.H.G.S.X.
0.3956.10.95Ta.8327.1.A1_s_atBQ161744--1e+0At4g04614unknown proteinO.I.H.G.S.X.
0.3854.70.97Ta.2864.1.S1_atCK208206--5e-7At5g36890BGLU42 (BETA GLUCOSIDASE 42)O.I.H.G.S.X.
0.3854.70.97Ta.6961.1.S1_atCA666763--4e-34At1g64650-O.I.H.G.S.X.
0.3651.90.96Ta.9386.1.S1_atCD938185--6e+0At5g44080bZIP transcription factor family proteinO.I.H.G.S.X.
0.3549.80.95Ta.4465.1.S1_atCD907121--2e+0At2g37210-O.I.H.G.S.X.
0.3549.80.96Ta.9325.1.S1_atBJ231941--5e-1At2g25690senescence-associated protein-relatedO.I.H.G.S.X.
0.3346.90.95Ta.4402.1.S1_atBQ169470osjnba0067N01.15 protein-1e-25At2g27960CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)O.I.H.G.S.X.
0.3244.40.97Ta.28022.3.S1_atBJ217501--5e-178At5g62690TUB2O.I.H.G.S.X.
0.3244.40.98Ta.2886.1.S1_atCK216405--5e-1At5g23100unknown proteinO.I.H.G.S.X.
0.2839.20.95Ta.6102.1.A1_atBJ303621--1e+0At3g01480CYP38 (cyclophilin 38)O.I.H.G.S.X.
0.2839.20.97Ta.9272.1.S1_atCD862379--2e-5At5g33320CUE1 (CAB UNDEREXPRESSED 1)O.I.H.G.S.X.
0.2735.60.97Ta.27657.4.S1_x_atBJ251672--3e-9At1g08880H2AXAO.I.H.G.S.X.
0.2633.60.96Ta.7215.1.A1_atBJ221434--5e+0At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialO.I.H.G.S.X.
0.2633.60.95Ta.29000.1.A1_atBQ169130--1e+0At4g04614unknown proteinO.I.H.G.S.X.
0.2633.60.97Ta.10108.1.S1_x_atBE516761--2e-17At2g35155catalyticO.I.H.G.S.X.
0.2532.10.96TaAffx.18131.1.S1_atCA606191--4e-2At1g51620protein kinase family proteinO.I.H.G.S.X.
0.2532.10.97Ta.7532.1.S1_a_atCK157061--1e-1At3g48346unknown proteinO.I.H.G.S.X.
0.2430.30.97Ta.28022.3.S1_x_atBJ217501--1e-178At5g62700TUB3O.I.H.G.S.X.
0.2329.00.98Ta.27101.2.S1_atCD868502--5e-19At4g40040histone H3.2O.I.H.G.S.X.
0.2329.00.98Ta.27657.6.S1_x_atBJ274465Protein H2A-1e-10At4g27230HTA2 (histone H2A)O.I.H.G.S.X.
0.2329.00.97Ta.27101.3.S1_atCK209895--4e-38At1g09200histone H3O.I.H.G.S.X.
0.2329.00.99Ta.3122.1.S1_a_atCA604535--6e-1At3g01570glycine-rich protein / oleosinO.I.H.G.S.X.
0.2329.00.97Ta.27101.3.S1_x_atCK209895--4e-38At1g09200histone H3O.I.H.G.S.X.
0.2227.10.96Ta.13849.1.S1_atBQ237677--4e-36At5g58230MSI1 (MULTICOPY SUPRESSOR OF IRA1)O.I.H.G.S.X.
0.1922.40.97Ta.10108.2.A1_x_atCA684446--2e-3At5g43150unknown proteinO.I.H.G.S.X.
0.1922.40.98Ta.7378.13.S1_atCA502238Histone H2B-8e-18At1g07790HTB1O.I.H.G.S.X.
0.1821.00.96Ta.9005.1.S1_s_atBQ162761--4e-6At1g61900unknown proteinO.I.H.G.S.X.
0.1719.80.97Ta.10108.2.A1_a_atCA684446--2e-3At5g43150unknown proteinO.I.H.G.S.X.
0.1618.20.97Ta.10419.1.S1_atCD454624--7e+0At4g25100FSD1 (FE SUPEROXIDE DISMUTASE 1)O.I.H.G.S.X.
0.1517.10.97Ta.2821.1.S1_atBJ237571--7e-14At3g57290EIF3E (EUKARYOTIC TRANSLATION INITIATION FACTOR 3E)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.298.5GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.998.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.496.8GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.996.1GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.896.0GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.592.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.492.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.190.3GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.089.7GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
1.988.9GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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