Co-expression analysis

Gene ID	Ta.581.2.S1_a_at
Gene name	hypothetical LOC543355
Homology with Arabidopsis	Similar to At2g35370: GDCH (HF=9e-3)
Module size	6 genes
NF	0.67
%ile	91.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.97	Ta.581.2.S1_a_at	CD862705	hypothetical LOC543355	-	9e-3	At2g35370	GDCH	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.581.1.S1_at	AY123417.1	hypothetical LOC543355	-	1e-7	At1g32470	glycine cleavage system H protein, mitochondrial, putative	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.98	Ta.4255.2.S1_x_at	CA627750	-	-	4e-3	At1g75690	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.4255.1.S1_x_at	BE591014	-	-	7e-3	At1g75690	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.2392.1.S1_x_at	CA623973	-	-	2e+0	At3g07450	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.97	Ta.3916.2.S1_x_at	CK213268	-	-	4e-1	At1g10960	ATFD1 (FERREDOXIN 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
23.3	99.8	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
18.5	99.7	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
17.0	99.6	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM314266	tissue type: seedling, leaf - rep1	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM298065	Leaf tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298056	Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298068	Leaf tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298055	Leaf tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM298066	Leaf tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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