Co-expression analysis

Gene ID	Ta.578.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g48185: unknown protein (HF=9e-1)
Module size	6 genes
NF	0.36
%ile	58.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.89	Ta.578.1.S1_at	BE489213	-	-	9e-1	At3g48185	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.88	Ta.6578.3.A1_at	BJ308193	-	-	1e+0	At2g31200	ADF6 (ACTIN DEPOLYMERIZING FACTOR 6)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.88	Ta.1391.2.S1_at	CK211679	-	-	9e-11	At2g24090	ribosomal protein L35 family protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.90	Ta.17974.1.A1_at	CA623388	-	-	4e-11	At1g56045	ribosomal protein L41 family protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.88	TaAffx.83608.1.S1_at	CA655505	-	-	4e+0	At4g10390	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.86	TaAffx.131855.1.S1_at	CA695496	-	-	6e+0	At3g01516	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.8	99.7	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
13.5	99.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
13.3	99.5	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
12.9	99.4	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
6.6	98.3	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.0	98.0	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.0	96.3	GSM246394	SB69_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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