Co-expression analysis

Gene ID	Ta.5522.2.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At2g13150: transcription factor (HF=1e+0)
Module size	6 genes
NF	0.59
%ile	85.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.0	0.96	Ta.5522.2.S1_a_at	CA699425	-	-	1e+0	At2g13150	transcription factor	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.96	Ta.6666.2.S1_at	CA640317	-	-	5e-12	At3g49420	Got1-like family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.96	Ta.6666.2.S1_x_at	CA640317	-	-	5e-12	At3g49420	Got1-like family protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.6666.3.S1_x_at	CA720211	-	-	4e-3	At3g03180	Got1-like family protein	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.96	TaAffx.96904.1.S1_at	BJ268172	-	-	1e+0	At5g14690	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.96	TaAffx.32308.1.S1_at	CA597142	-	-	1e+0	At2g19670	PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.3	98.6	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
7.3	98.6	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
6.9	98.4	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.8	97.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3	97.6	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
5.0	97.4	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
3.9	96.1	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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