Co-expression analysis

Gene ID Ta.5458.2.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g23900: 60S ribosomal protein L13 (RPL13D) (HF=2e+1)
Module size 6 genes
NF 0.82
%ile 97.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.99Ta.5458.2.S1_x_atCA608843--2e+1At5g2390060S ribosomal protein L13 (RPL13D)O.I.H.G.S.X.
0.9198.20.99Ta.19188.1.S1_atCK194373protease inhibitor-like protein-8e+0At5g35220EGY1 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1)O.I.H.G.S.X.
0.8393.40.99Ta.28160.1.S1_x_atCD867734--4e-3At1g07610MT1CO.I.H.G.S.X.
0.7188.00.98TaAffx.131605.1.S1_x_atCK201230--5e-1At5g62920ARR6 (RESPONSE REGULATOR 6)O.I.H.G.S.X.
0.6383.10.99Ta.5458.1.S1_x_atCA615319--1e-1At2g22980serine-type carboxypeptidaseO.I.H.G.S.X.
0.6081.00.99Ta.18672.1.S1_x_atCA603610--3e-1At1g07610MT1CO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.599.9GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
29.099.8GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
16.399.6GSM324489Si- B+ rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
11.399.3GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
8.498.9GSM324494Si+ B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.998.0GSM138210genotype B65 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
5.297.5GSM298081Leaf tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.197.5GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.897.2GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM324493Si+ B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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