Co-expression analysis

Gene ID	Ta.5442.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g47580: U1A (SPLICEOSOMAL PROTEIN U1A) (HF=2e-3)
Module size	7 genes
NF	0.51
%ile	76.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.47	67.9	0.98	Ta.5442.1.S1_at	CK193982	-	-	2e-3	At2g47580	U1A (SPLICEOSOMAL PROTEIN U1A)	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.98	Ta.28206.2.S1_x_at	BJ318149	-	-	1e+0	At5g48530	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.98	Ta.28206.1.S1_at	BQ162426	-	-	3e-2	At3g02220	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.28206.2.S1_a_at	BJ318149	-	-	1e+0	At5g48530	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.97	Ta.10537.2.A1_at	BQ804919	-	-	2e-9	At5g60990	DEAD/DEAH box helicase, putative (RH10)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.97	Ta.9748.2.S1_x_at	BJ238030	-	-	1e+0	At1g04240	SHY2 (SHORT HYPOCOTYL 2)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.98	Ta.3376.1.S1_s_at	BJ308421	-	-	2e-1	At4g02450	glycine-rich protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.1	99.6	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
4.2	96.6	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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