Co-expression analysis

Gene ID	Ta.5437.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g23750: remorin family protein (HF=4e-5)
Module size	6 genes
NF	0.55
%ile	81.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	76.8	0.89	Ta.5437.1.S1_at	CK204523	-	-	4e-5	At5g23750	remorin family protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.87	Ta.12714.2.S1_a_at	CK211871	-	-	1e-3	At4g35480	RHA3B	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.89	TaAffx.110147.1.S1_at	BG905569	-	-	1e+1	At4g37409	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.90	Ta.303.1.S1_at	BG906281	-	-	3e+0	At3g28590	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.89	Ta.303.1.S1_x_at	BG906281	-	-	3e+0	At3g28590	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.90	Ta.8988.1.S1_at	BQ162735	-	-	4e+0	At5g41810	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.2	99.3	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.0	98.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.3	98.2	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3	98.2	GSM250894	TcLr34_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM250912	TcLr34_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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