Co-expression analysis

Gene ID Ta.5396.2.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At5g48820: ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE) (HF=5e+0)
Module size 6 genes
NF 0.40
%ile 63.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.10.93Ta.5396.2.S1_a_atBJ287380--5e+0At5g48820ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE)O.I.H.G.S.X.
0.6081.00.91Ta.30294.1.S1_atCK201202--1e+0At5g58970ATUCP2 (UNCOUPLING PROTEIN 2)O.I.H.G.S.X.
0.5072.40.92TaAffx.86707.2.S1_s_atCA613140--1e+1At4g02970AT7SL-1 (Arabidopsis 7SL RNA 1)O.I.H.G.S.X.
0.4058.40.92Ta.147.1.S1_atM25537.1agglutinin isolectin D precursor-2e+0At5g66040STR16 (SULFURTRANSFERASE PROTEIN 16)O.I.H.G.S.X.
0.4058.40.93Ta.27658.1.S1_atBT009528.1--8e-29At2g19450TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)O.I.H.G.S.X.
0.1213.30.94Ta.731.1.S1_atBE516718--1e-1At4g28170unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.498.2GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.697.8GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.897.2GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.196.4GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.096.3GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.996.1GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.896.0GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.795.8GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM298093Crown tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM314265tissue type: seedling, crown - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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