Co-expression analysis

Gene ID Ta.5322.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g80120: unknown protein (HF=9e-3)
Module size 6 genes
NF 0.57
%ile 83.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.96Ta.5322.1.S1_atBJ285768--9e-3At1g80120unknown proteinO.I.H.G.S.X.
0.5576.80.96Ta.14771.1.S1_atCA681870--2e+0At5g48160OBE2 (OBERON2)O.I.H.G.S.X.
0.5072.40.97Ta.5401.3.S1_a_atCA593594--3e-1At5g08160ATPK3O.I.H.G.S.X.
0.4666.80.96Ta.28493.1.S1_x_atCA675210--2e-1At3g17160unknown proteinO.I.H.G.S.X.
0.4362.20.96Ta.28493.1.S1_atCA675210--2e-1At3g17160unknown proteinO.I.H.G.S.X.
0.4058.40.97Ta.5401.1.S1_a_atCD872229--2e-1At2g39400hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.897.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.897.2GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.196.4GSM250886TcLr1_3dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM250901Tc_7dpi_mock_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM143517Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.996.1GSM143504Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.996.1GSM143507Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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