Co-expression analysis

Gene ID	Ta.5248.2.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At2g30985: unknown protein (HF=2e+0)
Module size	8 genes
NF	0.57
%ile	83.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	69.0	0.76	Ta.5248.2.S1_x_at	CD373899	-	-	2e+0	At2g30985	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.94	Ta.18983.1.S1_at	CA645124	-	-	9e+0	At1g18730	NDF6 (NDH DEPENDENT FLOW 6)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.94	Ta.18983.1.S1_x_at	CA645124	-	-	9e+0	At1g18730	NDF6 (NDH DEPENDENT FLOW 6)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.95	TaAffx.38572.2.S1_at	BJ302888	-	-	4e-3	At5g60690	REV (REVOLUTA)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.79	Ta.5248.1.S1_x_at	CD453923	-	-	9e-1	At3g55880	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.94	Ta.16961.1.S1_at	CD893910	-	-	6e+0	At3g12730	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	Ta.1940.1.S1_x_at	BG604505	-	-	3e-1	At2g24810	pathogenesis-related thaumatin family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.5248.3.S1_a_at	CA661253	-	-	4e+0	At2g45320	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.9	99.3	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
10.3	99.2	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.6	98.7	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.5	98.6	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.7	98.4	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.4	98.2	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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