Co-expression analysis

Gene ID	Ta.5103.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g38680: GRP2 (GLYCINE RICH PROTEIN 2) (HF=1e-3)
Module size	6 genes
NF	0.75
%ile	95.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.99	Ta.5103.1.S1_at	BJ271759	-	-	1e-3	At4g38680	GRP2 (GLYCINE RICH PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.99	Ta.8258.2.S1_at	BJ233335	-	-	1e+0	At3g63095	-	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.11619.1.A1_at	CN011986	-	-	2e+1	At3g28958	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.99	Ta.8258.3.S1_at	CN012816	-	-	1e+0	At3g63095	-	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.99	Ta.22816.1.S1_x_at	CD885331	type 2 non-specific lipid transfer protein precursor	-	4e+0	At1g24510	T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.99	Ta.4900.1.S1_at	BJ232326	-	-	1e-3	At4g38680	GRP2 (GLYCINE RICH PROTEIN 2)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
27.8	99.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
23.9	99.8	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.8	99.3	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.1	90.3	GSM111219	genotype F29 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.0	89.7	GSM111232	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.0	89.7	GSM111245	genotype G13 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
1.8	88.1	GSM111214	genotype C58 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
1.8	88.1	GSM138205	genotype H8 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
1.7	87.1	GSM111216	genotype D15 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
1.7	87.1	GSM111231	genotype B33 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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