Co-expression analysis

Gene ID	Ta.5100.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g09590: MTHSC70-2 (MITOCHONDRIAL HSP70 2) (HF=5e-34)
Module size	18 genes
NF	0.42
%ile	66.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.90	94.8	0.98	Ta.5100.2.S1_at	BJ272656	-	-	5e-34	At5g09590	MTHSC70-2 (MITOCHONDRIAL HSP70 2)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.99	Ta.2502.2.A1_x_at	CD865828	HSP80-2	-	3e-57	At5g56010	HSP81-3	O.I.	H.G.	S.X.	Please select
0.49	69.7	0.99	Ta.18.1.S1_at	BJ241578	-	-	2e-113	At1g54270	EIF4A-2	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.99	Ta.27713.1.A1_x_at	CD879558	elongation factor-1 alpha	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.99	Ta.2739.3.S1_x_at	BJ298795	Ribosomal protein L19	-	5e-44	At3g16780	60S ribosomal protein L19 (RPL19B)	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.98	Ta.2502.3.A1_x_at	BJ306224	HSP80-2	-	4e-75	At5g56010	HSP81-3	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.98	Ta.7610.1.S1_a_at	CD889532	-	-	1e-6	At5g11560	catalytic	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.99	Ta.27713.2.A1_x_at	CD910422	Elongation factor-1 alpha	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.41	59.6	0.99	Ta.659.1.S1_x_at	BI751166	Translation elongation factor 1 alpha-subunit	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.99	Ta.2207.1.S1_at	CK200975	-	-	2e-56	At5g05780	RPN8A (RP NON-ATPASE SUBUNIT 8A)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.99	Ta.659.1.S1_at	BI751166	Translation elongation factor 1 alpha-subunit	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.98	Ta.2706.3.S1_at	CK205780	-	-	2e-15	At1g79920	ATP binding	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.99	Ta.659.3.S1_x_at	CD878859	Translation elongation factor 1 alpha-subunit	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.99	Ta.1406.1.S1_a_at	CK168374	-	-	2e-10	At1g07140	SIRANBP	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.98	Ta.23012.1.S1_at	AJ610851	-	-	7e-20	At1g20200	EMB2719 (EMBRYO DEFECTIVE 2719)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.98	Ta.1902.2.S1_a_at	CK209206	-	-	3e-4	At5g36230	eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.99	Ta.28855.1.S1_at	CK216562	-	-	3e-9	At3g57490	40S ribosomal protein S2 (RPS2D)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.99	Ta.27377.2.S1_x_at	BJ320612	-	-	2e-64	At3g52590	UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.3	99.7	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.7	98.7	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
7.4	98.6	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
7.2	98.5	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
4.6	97.0	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.6	95.6	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.5	92.5	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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